Skills
Python3
FastAPI, Flask, Selenium, website parsing, text data parsing.
TeX
Book layout, mathematical formulae render, scientific presentations.
Bioinformatics
NGS data QC, NGS data processing, NGS data clinical interpretation, bioinformatics software development.
Linux
Bash scripting, SSH configuration, Apache, Nginx, Lighttpd.
C / C++
Boost, Qt 6+, QML, OpenGL, GLM, cURL.
Cryptography
Tor, I2P, EFS, GnuPG, GPGME, Libgcrypt, Libassuan, Sodium.
Frontend
HTML5, CSS3, jQuery, AJAX, PureCSS, Bootstrap.
Blender
MakeHuman, SaplingTree, A.N.T. Landscape, asset generation, asset preparation for Godot.
Reengineering
Radare2, assembly development, disassembling.
QA
Unittest, Selenium, Pylint, Cppcheck, GTest, Codacy, bug reporting.
Vector design
Inkscape, vectorization of raster images, logo and icon design.
Nursing
Nursing care, management of medical records, laboratory tests.
Experience
Institute of Cytology & Genetics, SB RAS 2019—23
Ontogenesis Genomic Mechanisms Sector
Bioinformatics technician
- Research in genetics, molecular biology, and bioinformatics
- Processing, quality control, and interpretation of new generation sequencing data (WGS, WES, ChIP-seq, Hi-C, Exo-C)
- Administration and security control of laboratory servers
- Fullstack development, as part of research projects
- Bioinformatics tools development (Python, R, C, C++, Golang)
Freelance 2016—25
Various Projects
Developer
- Site parsing script development
- Writing term papers and dissertations on mathematical linguistics
- Document format conversion, TeX development
Cosmodent 2024—25
Department of Therapy
Assistant Dentist
- Assisting the dentist during appointments: therapy, orthopedics, pediatric dentistry
- Preparing the operation area, cleaning of premises
- Maintenance of the dental tools, configuration of the medical devices
- Stock accounting, restocking
- Dental computed tomography, RVG single tooth images
Projects
Pawpyrus
Pawpyrus is a minimalist FOSS paper data storage based on QR codes and ArUco. It generates a PDF from any small-sized binary file. Further the paper storage can be scanned and decoded. The script is pure Python and a part of PyPI, so can be installed via pip.
Muppy
Muppy stands for MarkUp Preprocessor for Python, a simple exec() script which execute instructions inside comments. For now, Muppy can recognize C-styled, Python-styled, XML-styled and TeX-styled comments. The script is pure Python and a part of PyPI, so can be installed via pip.
Listvennica's Mod
Listvennica's Mod is a decorative mod for Minecraft based on Fabric. It adds some blocks inspired with Siberian architecture. The mod is a part of Modrinth.
Education
Novosibirsk State University '22
Vladimir Zelman Institute for Medicine and Psychology
Qualification: General practitioner
Advanced Training Courses
MGNGS School '21
Bochkov's Research Centre for Medical Genetics
Clinical analysis and interpretation of NGS data
Publications15
Direction and modality of transcription changes caused by TAD boundary disruption in Slc29a3/Unc5b locus depends on tissue-specific epigenetic context
Combining chromosome conformation capture and exome sequencing for simultaneous detection of structural and single-nucleotide variants
Genome Medicine (2025)
Gridina, M., Lagunov, T., Belokopytova, P., Torgunakov, N., Nuriddinov, M., Nurislamov, A., Nazarenko, L. P., Kashevarova, A. A., Lopatkina, M. E., Vasilyev, S., Zuev, A., Belyaeva, E. O., Salyukova, O. A., Cheremnykh, A. D., Suhanova, N. N., Minzhenkova, M. E., Markova, Zh. G., Demina, N. A., Stepanchuk, Ya., Khabarova, A., Yan, A., Valeev, E., Koksharova, G., Grigor’eva, E. V., Kokh, N., Lukjanova, T., Maximova, Yu., Musatova, E., Shabanova, E., Kechin, A., Khrapov, E., Boyarskih, U., Ryzhkova, O., Suntsova, M., Matrosova, A., Karoli, M., Manakhov, A., Filipenko, M., Rogaev, E., Shilova, N. V., Lebedev, I. N., Fishman, V.